Have you been craving something sweet but thought your keto lifestyle meant saying goodbye to cheesecake forever? Think again! These keto mini cheesecakes are about to become your new favorite guilt-free indulgence. I've spent countless hours perfecting this recipe, and I'm thrilled to share it with you because everyone deserves a delicious dessert that actually fits their goals.
What makes these keto mini cheesecakes so special is their perfect balance of creamy richness and satisfying sweetness without a single grain of sugar. Whether you're hosting a dinner party or simply need a late-night snack that won't derail your progress, these individual keto mini cheesecakes deliver every single time.

Why These Keto Mini Cheesecakes Are Simply Unbeatable
Traditional cheesecakes are loaded with sugar and graham cracker crusts that can kick you right out of ketosis, but these keto mini cheesecakes change the game completely. Using almond flour for the crust and your choice of sugar-free sweetener, you get all the decadent flavor without the carb overload. Each bite delivers that classic New York-style cheesecake texture; rich, smooth, and utterly satisfying.
What truly sets these keto mini cheesecakes apart is their versatility and convenience. The individual portions mean perfect portion control, and they're incredibly portable for packed lunches or potlucks. Plus, the almond flour crust adds a delightful nutty flavor that actually tastes better than traditional graham cracker crusts.
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Ingredients
For the Almond Flour Crust:
- Almond flour
- Butter (melted)
- Erythritol or monk fruit sweetener
- Vanilla extract
- Salt
For the Cream Cheese Filling:
- Cream cheese (full-fat, softened)
- Sour cream
- Eggs
- Powdered erythritol
- Vanilla extract
- Lemon juice
- Salt
Optional Toppings:
- Sugar-free whipped cream
- Fresh berries
- Sugar-free chocolate chips
- Lemon zest

See recipe card for quantities.
Instructions
Prepare the Crust and Setup
- Preheat your oven to 325°F and line a muffin tin with cupcake liners
- Mix almond flour, melted butter, sweetener, vanilla, and salt until it resembles wet sand
- Press about 1 tablespoon of the crust mixture firmly into the bottom of each muffin cup
- Bake the crusts for 8-10 minutes until lightly golden, then let cool
Make the Cheesecake Filling
- Beat softened cream cheese until smooth and fluffy with no lumps
- Add powdered sweetener, sour cream, vanilla extract, lemon juice, and salt
- Add eggs one at a time on low speed, mixing just until incorporated
- Pour the filling over the pre-baked crusts, filling each cup about three-quarters full
Bake and Cool Properly
- Bake at 325°F for 18-22 minutes until centers are just set but slightly jiggly
- Turn off the oven, crack the door open, and let cool inside for 30 minutes
- Remove and cool completely at room temperature for 1 hour
- Refrigerate for at least 4 hours or overnight before serving
Equipment For Keto Mini Cheesecakes
- Standard 12-cup muffin tin
- Cupcake liners
- Electric hand mixer or stand mixer
- Large mixing bowls
- Measuring cups and spoons
- Rubber spatula
- Wire cooling rack
Expert Cooking Tips
- Always use full-fat, brick-style cream cheese at room temperature for the best texture in your keto mini cheesecakes
- Don't overmix the batter once you add the eggs, as this causes cracks during baking
- The "jiggly center" test is crucial; they should wobble slightly when you shake the pan
- Let cheesecakes come to room temperature for 15 minutes before serving for the best flavor
- Use parchment paper cupcake liners for the easiest removal without sticking
Recipe Variations
- Chocolate Lovers: Add unsweetened cocoa powder to the filling and top with sugar-free chocolate ganache for decadent keto mini cheesecakes
- Berry Swirl: Drop dollops of sugar-free berry compote on top before baking and swirl with a toothpick
- Pumpkin Spice: Mix in pumpkin puree and pumpkin pie spice for seasonal keto pumpkin mini cheesecakes
- Lemon Bliss: Add extra lemon zest and fresh lemon juice for tangy lemon mini cheesecakes
- No-Bake Version: Skip baking and refrigerate for 6 hours for easy keto no bake mini cheesecakes
Storage
- Refrigerator Storage: Keep keto mini cheesecakes in an airtight container in the fridge for up to 7 days
- Freezer Storage: Wrap individually in plastic wrap and freeze for up to 3 months
- Thawing Instructions: Transfer frozen cheesecakes to the refrigerator overnight to thaw slowly
- Room Temperature Warning: Don't leave cheesecakes at room temperature for more than 2 hours
- Topping Timing: Add fresh fruit or whipped cream right before serving to prevent sogginess
The Secret Behind Perfect Keto Cheesecakes Every Time
Here's what bakeries don't want you to know: the secret to incredible keto mini cheesecakes isn't expensive ingredients or fancy techniques; it's all about temperature control and patience. Most people rush the cooling process, but those gradual temperature changes are what prevent ugly cracks and ensure that silky-smooth texture. When you turn off the oven and let your cheesecakes cool slowly with the door cracked, you're allowing the proteins to set gently rather than seizing up from sudden temperature shock.
The other game-changing secret is using powdered sweetener instead of granular. Powdered versions dissolve completely into the batter, giving you that professional bakery-quality smoothness in your keto mini cheesecakes. You can make your own by blending granulated sweetener in a coffee grinder for 30 seconds.
FAQ
How long can mini cheesecakes sit out?
Mini cheesecakes should not sit out at room temperature for more than 2 hours, as they contain dairy products that can spoil quickly. For food safety, always refrigerate your keto mini cheesecakes within this timeframe, especially during warm weather. If you're serving them at a party, consider keeping them on ice. The cream cheese and eggs make them perishable, so proper temperature control is essential for both safety and maintaining that perfect creamy texture.
What are the biggest mistakes people make on a keto diet?
The biggest mistakes people make on keto include not eating enough healthy fats, consuming hidden carbs in processed foods, and giving up too quickly during adaptation. Many beginners also fail to track their macros properly and don't supplement electrolytes leading to "keto flu." Another common error is eating too much protein, which can convert to glucose. That's why keto mini cheesecakes are perfect; they're portion-controlled, made with whole-food ingredients, and provide healthy fats while satisfying sweet cravings without the carb overload.
Is the low carb cheesecake at Cheesecake Factory keto friendly?
The Cheesecake Factory's low-carb cheesecake contains approximately 16-20g net carbs per slice, which is too high for most people following strict keto where daily carb limits typically range from 20-50g total. While it's lower in carbs than regular cheesecakes, it's still made with sugar. That's precisely why making keto mini cheesecakes at home is so valuable; you control every ingredient and can keep each serving under 3-4g net carbs while customizing flavors to your preferences.
Do mini cheesecakes need a water bath?
Mini cheesecakes typically don't require a water bath because their small size allows them to bake evenly without the risk of cracking that full-sized cheesecakes face. The reduced baking time means these keto mini cheesecakes cook through gently without needing the moisture regulation a water bath provides. However, if you're nervous about cracking, you can place a pan of hot water on the rack below your muffin tin. The gradual cooling method we use is usually sufficient to prevent cracks.
Your Keto Dessert Journey Starts Here
Now that you've mastered these incredible keto mini cheesecakes, you're equipped with a dessert that proves low-carb eating never has to feel restrictive or boring. These individual treats offer the perfect solution for portion control and satisfying those inevitable sweet cravings without guilt. The beauty of this recipe is its versatility; you can make a dozen on Sunday and have perfectly portioned desserts ready all week long.
Ready to expand your keto dessert repertoire even further? Once you've fallen in love with these keto mini cheesecakes, I highly recommend trying our Blueberry Crumble Cheesecake Recipe - 3 Simple Steps for a fruity twist that's equally impressive. And when the holidays roll around, our Ultimate Gingerbread Cheesecake Recipe will become your go-to showstopper. These three recipes together give you a complete arsenal of low-carb desserts that'll make you forget sugar ever existed!
From my kitchen, with heart.
Megan Riley ❤️
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Pairing
These are my favorite dishes to serve with Keto Mini Cheesecakes

Keto Mini Cheesecakes
Equipment
- 1 Muffin tin (12-cup) standard size
- 12 Cupcake liners parchment recommended
- 1 Hand mixer or stand mixer for smooth batter
- 2 Mixing bowls large
- 1 set Measuring cups/spoons
- 1 Rubber spatula for folding
- 1 Wire cooling rack for cooling
Ingredients
Almond Flour Crust
- 1 cup Almond flour
- 3 tablespoon Butter, melted unsalted
- 2 tablespoon Erythritol (powdered) or monk fruit
- 1 teaspoon Vanilla extract
- 1 pinch Salt
Cheesecake Filling
- 16 oz Cream cheese softened, full-fat
- 2 Eggs room temperature
- ⅓ cup Sour cream full-fat
- ½ cup Powdered erythritol
- 1 teaspoon Vanilla extract
- 1 teaspoon Lemon juice fresh
- 1 pinch Salt
Optional Toppings
- Sugar free whipped cream garnish
- Fresh berries garnish
- Sugar free chocolate chips garnish
- Lemon zest garnish
Instructions
- Preheat oven to 325°F; line muffin tin with cupcake liners.
- Mix almond flour, butter, sweetener, vanilla, and salt; press into liners.
- Bake crusts 8–10 minutes until golden; cool.
- Beat cream cheese smooth; add sweetener, sour cream, vanilla, lemon, and salt.
- Add eggs one at a time; mix gently; fill muffin cups ¾ full.
- Bake 18–22 minutes until set but jiggly.
- Cool in oven 30 mins; then room temp 1 hr; refrigerate 4 hrs or overnight.
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